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» An Ant-Based Model for Multiple Sequence Alignment
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NIPS
2004
13 years 9 months ago
Multiple Alignment of Continuous Time Series
Multiple realizations of continuous-valued time series from a stochastic process often contain systematic variations in rate and amplitude. To leverage the information contained i...
Jennifer Listgarten, Radford M. Neal, Sam T. Rowei...
RECOMB
2006
Springer
14 years 7 months ago
Detecting the Dependent Evolution of Biosequences
Abstract. A probabilistic graphical model is developed in order to detect the dependent evolution between different sites in biological sequences. Given a multiple sequence alignme...
Jeremy Darot, Chen-Hsiang Yeang, David Haussler
RECOMB
2010
Springer
14 years 2 months ago
Alignment-Free Phylogenetic Reconstruction
We introduce the first polynomial-time phylogenetic reconstruction algorithm under a model of sequence evolution allowing insertions and deletions—or indels. Given appropriate ...
Constantinos Daskalakis, Sébastien Roch
NAR
2007
109views more  NAR 2007»
13 years 7 months ago
GeneTrees: a phylogenomics resource for prokaryotes
The GeneTrees phylogenomics system pursues comparative genomic analyses from the perspective of gene phylogenies for individual genes. The GeneTrees project has the goal of provid...
Yuying Tian, Allan W. Dickerman
ICRA
2010
IEEE
135views Robotics» more  ICRA 2010»
13 years 6 months ago
Using multiple hypothesis in model-based tracking
— Classic registration methods for model-based tracking try to align the projected edges of a 3D model with the edges of the image. However, wrong matches at low level can make t...
Céline Teuliere, Éric Marchand, Laur...