We have developed a mathematical framework for representing and testing hypotheses about gene, protein, and signaling molecule interactions. It takes a hierarchical, contradiction...
A wide variety of Dirichlet-multinomial ‘topic’ models have found interesting applications in recent years. While Gibbs sampling remains an important method of inference in su...
In non-ergodic belief networks the posterior belief of many queries given evidence may become zero. The paper shows that when belief propagation is applied iteratively over arbitr...
A posteriori error estimates are derived for unsteady convection-diffusion equations discretized with the non-symmetric interior penalty and the local discontinuous Galerkin metho...
: A recent workshop titled ‘‘Quantitative Computational Biophysics’’ at Florida State University provided an overview of the state of the art in quantitative modeling of bi...
Wei Yang, Hugh Nymeyer, Huan-Xiang Zhou, Bernd A. ...