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» An Expressive Extension of TLC
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NAR
2010
194views more  NAR 2010»
13 years 5 months ago
AltAnalyze and DomainGraph: analyzing and visualizing exon expression data
Alternative splicing is an important mechanism for increasing protein diversity. However, its functional effects are largely unknown. Here, we present our new software workflow co...
Dorothea Emig, Nathan Salomonis, Jan Baumbach, Tho...
WWW
2008
ACM
14 years 11 months ago
A logical framework for modeling and reasoning about semantic web services contract
In this paper, we incorporate concrete domain and action theory into a very expressive Description Logic (DL), called ALCQO. Notably, this extension can significantly augment the ...
Hai Liu, Qing Li, Naijie Gu, An Liu
BMCBI
2010
127views more  BMCBI 2010»
13 years 11 months ago
SplicerAV: a tool for mining microarray expression data for changes in RNA processing
Background: Over the past two decades more than fifty thousand unique clinical and biological samples have been assayed using the Affymetrix HG-U133 and HG-U95 GeneChip microarray...
Timothy J. Robinson, Michaela A. Dinan, Mark Dewhi...
BMCBI
2007
116views more  BMCBI 2007»
13 years 11 months ago
Cloning, analysis and functional annotation of expressed sequence tags from the Earthworm Eisenia fetida
Background: Eisenia fetida, commonly known as red wiggler or compost worm, belongs to the Lumbricidae family of the Annelida phylum. Little is known about its genome sequence alth...
Mehdi Pirooznia, Ping Gong, Xin Guan, Laura S. Ino...
BMCBI
2011
13 years 6 months ago
GCOD - GeneChip Oncology Database
Background: DNA microarrays have become a nearly ubiquitous tool for the study of human disease, and nowhere is this more true than in cancer. With hundreds of studies and thousan...
Fenglong Liu, Joseph White, Corina Antonescu, John...