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BMCBI
2007
155views more  BMCBI 2007»
13 years 7 months ago
ProMEX: a mass spectral reference database for proteins and protein phosphorylation sites
Background: In the last decade, techniques were established for the large scale genome-wide analysis of proteins, RNA, and metabolites, and database solutions have been developed ...
Jan Hummel, Michaela Niemann, Stefanie Wienkoop, W...
BMCBI
2005
89views more  BMCBI 2005»
13 years 7 months ago
An empirical analysis of training protocols for probabilistic gene finders
Background: Generalized hidden Markov models (GHMMs) appear to be approaching acceptance as a de facto standard for state-of-the-art ab initio gene finding, as evidenced by the re...
William H. Majoros, Steven Salzberg
KDD
2004
ACM
151views Data Mining» more  KDD 2004»
14 years 8 months ago
Feature selection in scientific applications
Numerous applications of data mining to scientific data involve the induction of a classification model. In many cases, the collection of data is not performed with this task in m...
Erick Cantú-Paz, Shawn Newsam, Chandrika Ka...
CIKM
2007
Springer
14 years 1 months ago
Improving the classification of newsgroup messages through social network analysis
Newsgroup participants interact with their communities through conversation threads. They may respond to a message to answer a question, debate a topic, support or disagree with a...
Blaz Fortuna, Eduarda Mendes Rodrigues, Natasa Mil...
BMCBI
2010
143views more  BMCBI 2010»
13 years 7 months ago
ETE: a python Environment for Tree Exploration
Background: Many bioinformatics analyses, ranging from gene clustering to phylogenetics, produce hierarchical trees as their main result. These are used to represent the relations...
Jaime Huerta-Cepas, Joaquín Dopazo, Toni Ga...