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BMCBI
2007
155views more  BMCBI 2007»
15 years 6 months ago
ProMEX: a mass spectral reference database for proteins and protein phosphorylation sites
Background: In the last decade, techniques were established for the large scale genome-wide analysis of proteins, RNA, and metabolites, and database solutions have been developed ...
Jan Hummel, Michaela Niemann, Stefanie Wienkoop, W...
BMCBI
2005
89views more  BMCBI 2005»
15 years 6 months ago
An empirical analysis of training protocols for probabilistic gene finders
Background: Generalized hidden Markov models (GHMMs) appear to be approaching acceptance as a de facto standard for state-of-the-art ab initio gene finding, as evidenced by the re...
William H. Majoros, Steven Salzberg
KDD
2004
ACM
151views Data Mining» more  KDD 2004»
16 years 6 months ago
Feature selection in scientific applications
Numerous applications of data mining to scientific data involve the induction of a classification model. In many cases, the collection of data is not performed with this task in m...
Erick Cantú-Paz, Shawn Newsam, Chandrika Ka...
CIKM
2007
Springer
16 years 12 days ago
Improving the classification of newsgroup messages through social network analysis
Newsgroup participants interact with their communities through conversation threads. They may respond to a message to answer a question, debate a topic, support or disagree with a...
Blaz Fortuna, Eduarda Mendes Rodrigues, Natasa Mil...
BMCBI
2010
143views more  BMCBI 2010»
15 years 6 months ago
ETE: a python Environment for Tree Exploration
Background: Many bioinformatics analyses, ranging from gene clustering to phylogenetics, produce hierarchical trees as their main result. These are used to represent the relations...
Jaime Huerta-Cepas, Joaquín Dopazo, Toni Ga...