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» An analysis framework for search sequences
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BMCBI
2006
129views more  BMCBI 2006»
13 years 8 months ago
EGenBio: A Data Management System for Evolutionary Genomics and Biodiversity
Background: Evolutionary genomics requires management and filtering of large numbers of diverse genomic sequences for accurate analysis and inference on evolutionary processes of ...
Laila A. Nahum, Matthew T. Reynolds, Zhengyuan O. ...
BMCBI
2007
134views more  BMCBI 2007»
13 years 8 months ago
PLAN: a web platform for automating high-throughput BLAST searches and for managing and mining results
Background: BLAST searches are widely used for sequence alignment. The search results are commonly adopted for various functional and comparative genomics tasks such as annotating...
Ji He, Xinbin Dai, Xuechun Zhao
BIBM
2009
IEEE
113views Bioinformatics» more  BIBM 2009»
13 years 11 months ago
Fast Motif Selection for Biological Sequences
—We consider the problem of identifying motifs, recurring or conserved patterns, in the sets of biological sequences. To solve this task, we present new deterministic and exact a...
Pavel P. Kuksa, Vladimir Pavlovic
DEXAW
2008
IEEE
183views Database» more  DEXAW 2008»
14 years 2 months ago
Audio-Visual Content Analysis in P2P Networks: The SAPIR Approach
Content based search in audio-visual collections requires media specific analysis for extracting low level features to be efficiently indexed and searched. We present the SAPIR ...
Walter Allasia, Fabrizio Falchi, Francesco Gallo, ...
BMCBI
2007
166views more  BMCBI 2007»
13 years 8 months ago
Data handling strategies for high throughput pyrosequencers
Background: New high throughput pyrosequencers such as the 454 Life Sciences GS 20 are capable of massively parallelizing DNA sequencing providing an unprecedented rate of output ...
Gabriele A. Trombetti, Raoul J. P. Bonnal, Ermanno...