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» An application of statistics to comparative metagenomics
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BMCBI
2007
103views more  BMCBI 2007»
13 years 8 months ago
A comprehensive evaluation of SAM, the SAM R-package and a simple modification to improve its performance
Background: The Significance Analysis of Microarrays (SAM) is a popular method for detecting significantly expressed genes and controlling the false discovery rate (FDR). Recently...
Shunpu Zhang
PAMI
2006
230views more  PAMI 2006»
13 years 8 months ago
Shape Registration in Implicit Spaces Using Information Theory and Free Form Deformations
We present a novel variational and statistical approach for shape registration. Shapes of interest are implicitly embedded in a higher dimensional space of distance transforms. In...
Xiaolei Huang, Nikos Paragios, Dimitris N. Metaxas
BMCBI
2005
122views more  BMCBI 2005»
13 years 8 months ago
FACT - a framework for the functional interpretation of high-throughput experiments
Background: Interpreting the results of high-throughput experiments, such as those obtained from DNA-microarrays, is an often time-consuming task due to the high number of data-po...
Felix Kokocinski, Nicolas Delhomme, Gunnar Wrobel,...
BMCBI
2005
189views more  BMCBI 2005»
13 years 8 months ago
A sentence sliding window approach to extract protein annotations from biomedical articles
Background: Within the emerging field of text mining and statistical natural language processing (NLP) applied to biomedical articles, a broad variety of techniques have been deve...
Martin Krallinger, Maria Padron, Alfonso Valencia
BMCBI
2004
111views more  BMCBI 2004»
13 years 7 months ago
Multiclass discovery in array data
Background: A routine goal in the analysis of microarray data is to identify genes with expression levels that correlate with known classes of experiments. In a growing number of ...
Yingchun Liu, Markus Ringnér