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BMCBI
2006
112views more  BMCBI 2006»
13 years 8 months ago
A phylogenomic gene cluster resource: the Phylogenetically Inferred Groups (PhIGs) database
Background: We present here the PhIGs database, a phylogenomic resource for sequenced genomes. Although many methods exist for clustering gene families, very few attempt to create...
Paramvir S. Dehal, Jeffrey L. Boore
BMCBI
2007
207views more  BMCBI 2007»
13 years 8 months ago
Analyzing in situ gene expression in the mouse brain with image registration, feature extraction and block clustering
Background: Many important high throughput projects use in situ hybridization and may require the analysis of images of spatial cross sections of organisms taken with cellular lev...
Manjunatha Jagalur, Chris Pal, Erik G. Learned-Mil...
ISNN
2004
Springer
14 years 1 months ago
A Novel Clustering Analysis Based on PCA and SOMs for Gene Expression Patterns
This paper proposes a novel clustering analysis algorithm based on principal component analysis (PCA) and self-organizing maps (SOMs) for clustering the gene expression patterns. T...
Hong-Qiang Wang, De-Shuang Huang, Xing-Ming Zhao, ...
APBC
2004
138views Bioinformatics» more  APBC 2004»
13 years 9 months ago
Whole-Genome Functional Classification of Genes by Latent Semantic Analysis on Microarray Data
Quantitative simultaneous monitoring of the expression levels of thousands of genes under various experimental conditions is now possible using microarray experiments. The resulti...
See-Kiong Ng, Zexuan Zhu, Yew-Soon Ong
BMCBI
2010
153views more  BMCBI 2010»
13 years 7 months ago
DiffCoEx: a simple and sensitive method to find differentially coexpressed gene modules
Background: Large microarray datasets have enabled gene regulation to be studied through coexpression analysis. While numerous methods have been developed for identifying differen...
Bruno M. Tesson, Rainer Breitling, Ritsert C. Jans...