A new graph-based evolutionary algorithm named “Genetic Network Programming, GNP” has been proposed. GNP represents its solutions as directed graph structures, which can improv...
We propose an algorithm for estimating the common secondary structure, alignment, and posterior base pairing probabilities for two RNA sequences. A definition of structural align...
Arif Ozgun Harmanci, Gaurav Sharma, David H. Mathe...
Scratch-pad memories (SPMs) enable fast access to time-critical data. While prior research studied both static and dynamic SPM management strategies, not being able to keep all ho...
Ozcan Ozturk, Mahmut T. Kandemir, I. Demirkiran, G...
A data structure is said to be persistent when any update operation returns a new structure without altering the old version. This paper introduces a new notion of persistence, cal...
Background: Multiple sequence alignment algorithms are very important tools in molecular biology today. Accurate alignment of proteins is central to several areas such as homology...
Saikat Chakrabarti, Nitin Bhardwaj, Prem A. Anand,...