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» Analysis of Functional MRI Data Using Mutual Information
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BMCBI
2006
130views more  BMCBI 2006»
13 years 8 months ago
4SALE - A tool for synchronous RNA sequence and secondary structure alignment and editing
Background: In sequence analysis the multiple alignment builds the fundament of all proceeding analyses. Errors in an alignment could strongly influence all succeeding analyses an...
Philipp N. Seibel, Tobias Müller, Thomas Dand...
PODC
2006
ACM
14 years 2 months ago
Optimal-stretch name-independent compact routing in doubling metrics
We consider the problem of name-independent routing in doubling metrics. A doubling metric is a metric space whose doubling dimension is a constant, where the doubling dimension o...
Goran Konjevod, Andréa W. Richa, Donglin Xi...
SIGMOD
2006
ACM
149views Database» more  SIGMOD 2006»
14 years 8 months ago
Efficient query processing on unstructured tetrahedral meshes
Modern scientific applications consume massive volumes of data produced by computer simulations. Such applications require new data management capabilities in order to scale to te...
Stratos Papadomanolakis, Anastassia Ailamaki, Juli...
BMCBI
2002
137views more  BMCBI 2002»
13 years 8 months ago
ORFer - retrieval of protein sequences and open reading frames from GenBank and storage into relational databases or text files
Background: Functional genomics involves the parallel experimentation with large sets of proteins. This requires management of large sets of open reading frames as a prerequisite ...
Konrad Büssow, Steve Hoffmann, Volker Sievert
BMCBI
2010
205views more  BMCBI 2010»
13 years 8 months ago
A fast indexing approach for protein structure comparison
Background: Protein structure comparison is a fundamental task in structural biology. While the number of known protein structures has grown rapidly over the last decade, searchin...
Lei Zhang, James Bailey, Arun Siddharth Konagurthu...