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BMCBI
2007
135views more  BMCBI 2007»
13 years 7 months ago
Automatic extraction of reliable regions from multiple sequence alignments
Background: High quality multiple alignments are crucial in the transfer of annotation from one genome to another. Multiple alignment methods strive to achieve ever increasing lev...
Timo Lassmann, Erik L. L. Sonnhammer
BMCBI
2005
125views more  BMCBI 2005»
13 years 7 months ago
Query3d: a new method for high-throughput analysis of functional residues in protein structures
Background: The identification of local similarities between two protein structures can provide clues of a common function. Many different methods exist for searching for similar ...
Gabriele Ausiello, Allegra Via, Manuela Helmer-Cit...
SIGSOFT
2010
ACM
13 years 5 months ago
The missing links: bugs and bug-fix commits
Empirical studies of software defects rely on links between bug databases and program code repositories. This linkage is typically based on bug-fixes identified in developer-enter...
Adrian Bachmann, Christian Bird, Foyzur Rahman, Pr...
CHI
2009
ACM
14 years 8 months ago
Musink: composing music through augmented drawing
We focus on the creative use of paper in the music composition process, particularly the interaction between paper and end-user programming. When expressing musical ideas, compose...
Theophanis Tsandilas, Catherine Letondal, Wendy E....
POPL
2006
ACM
14 years 8 months ago
Associating synchronization constraints with data in an object-oriented language
Concurrency-related bugs may happen when multiple threads access shared data and interleave in ways that do not correspond to any sequential execution. Their absence is not guaran...
Mandana Vaziri, Frank Tip, Julian Dolby