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    BMCBI
    2010
    109views more  BMCBI 2010»
    Prediction of the binding affinities of peptides to class II MHC using a regularized thermodynamic model
    13 years 8 months ago
    Prediction of the binding affinities of peptides to class II MHC using a regularized thermodynamic model
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    Background: The binding of peptide fragments of extracellular peptides to class II MHC is a crucial event in the adaptive immune response. Each MHC allotype generally binds a dist...
    Andrew J. Bordner, Hans D. Mittelmann
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    BMCBI
    2010
    156views more  BMCBI 2010»
    Mathematical model for empirically optimizing large scale production of soluble protein domains
    13 years 8 months ago
    Mathematical model for empirically optimizing large scale production of soluble protein domains
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    Background: Efficient dissection of large proteins into their structural domains is critical for high throughput proteome analysis. So far, no study has focused on mathematically ...
    Eisuke Chikayama, Atsushi Kurotani, Takanori Tanak...
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    BMCBI
    2010
    103views more  BMCBI 2010»
    PostMod: sequence based prediction of kinase-specific phosphorylation sites with indirect relationship
    13 years 8 months ago
    PostMod: sequence based prediction of kinase-specific phosphorylation sites with indirect relationship
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    Background: Post-translational modifications (PTMs) have a key role in regulating cell functions. Consequently, identification of PTM sites has a significant impact on understandi...
    Inkyung Jung, Akihisa Matsuyama, Minoru Yoshida, D...
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    BMCBI
    2007
    109views more  BMCBI 2007»
    A domain-based approach to predict protein-protein interactions
    13 years 8 months ago
    A domain-based approach to predict protein-protein interactions
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    Background: Knowing which proteins exist in a certain organism or cell type and how these proteins interact with each other are necessary for the understanding of biological proce...
    Mudita Singhal, Haluk Resat
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    BMCBI
    2008
    118views more  BMCBI 2008»
    MetWAMer: eukaryotic translation initiation site prediction
    13 years 8 months ago
    MetWAMer: eukaryotic translation initiation site prediction
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    Background: Translation initiation site (TIS) identification is an important aspect of the gene annotation process, requisite for the accurate delineation of protein sequences fro...
    Michael E. Sparks, Volker Brendel
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