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IEEEPACT
2008
IEEE
14 years 5 months ago
Multi-optimization power management for chip multiprocessors
The emergence of power as a first-class design constraint has fueled the proposal of a growing number of run-time power optimizations. Many of these optimizations trade-off power...
Ke Meng, Russ Joseph, Robert P. Dick, Li Shang
IPPS
2008
IEEE
14 years 5 months ago
Overcoming scaling challenges in biomolecular simulations across multiple platforms
NAMD† is a portable parallel application for biomolecular simulations. NAMD pioneered the use of hybrid spatial and force decomposition, a technique now used by most scalable pr...
Abhinav Bhatele, Sameer Kumar, Chao Mei, James C. ...
AICCSA
2007
IEEE
124views Hardware» more  AICCSA 2007»
14 years 5 months ago
The Maximum Common Subgraph Problem: Faster Solutions via Vertex Cover
In the maximum common subgraph (MCS) problem, we are given a pair of graphs and asked to find the largest induced subgraph common to them both. With its plethora of applications,...
Faisal N. Abu-Khzam, Nagiza F. Samatova, Mohamad A...
BIBE
2007
IEEE
128views Bioinformatics» more  BIBE 2007»
14 years 5 months ago
QOMA2: Optimizing the alignment of many sequences
Abstract—We consider the problem of aligning multiple protein sequences with the goal of maximizing the SP (Sum-of-Pairs) score, when the number of sequences is large. The QOMA (...
Xu Zhang, Tamer Kahveci
CODES
2007
IEEE
14 years 5 months ago
HW/SW co-design for Esterel processing
We present a co-synthesis approach that accelerates reactive software processing by moving the calculation of complex expressions into external combinational hardware. The startin...
Sascha Gädtke, Claus Traulsen, Reinhard von H...
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