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GECCO
2004
Springer
139views Optimization» more  GECCO 2004»
14 years 1 months ago
Chemical Genetic Programming - Coevolution Between Genotypic Strings and Phenotypic Trees
Chemical Genetic Programming (CGP) is a new method of genetic programming that introduced collision-based biochemical processes and realized dynamic mapping from genotypic strings ...
Wojciech Piaseczny, Hideaki Suzuki, Hidefumi Sawai
STACS
1992
Springer
13 years 11 months ago
Speeding Up Two String-Matching Algorithms
We show how to speed up two string-matching algorithms: the Boyer-Moore algorithm (BM algorithm), and its version called here the reverse factor algorithm (RF algorithm). The RF al...
Maxime Crochemore, Thierry Lecroq, Artur Czumaj, L...
BMCBI
2008
103views more  BMCBI 2008»
13 years 7 months ago
TOPS++FATCAT: Fast flexible structural alignment using constraints derived from TOPS+ Strings Model
Background: Protein structure analysis and comparison are major challenges in structural bioinformatics. Despite the existence of many tools and algorithms, very few of them have ...
Mallika Veeramalai, Yuzhen Ye, Adam Godzik
CIKM
2006
Springer
13 years 11 months ago
Describing differences between databases
We study the novel problem of efficiently computing the update distance for a pair of relational databases. In analogy to the edit distance of strings, we define the update distan...
Heiko Müller, Johann Christoph Freytag, Ulf L...
JCC
2010
113views more  JCC 2010»
13 years 6 months ago
MDLab: A molecular dynamics simulation prototyping environment
Molecular dynamics (MD) simulation involves solving Newton’s equations of motion for a system of atoms, by calculating forces and updating atomic positions and velocities over a...
Trevor M. Cickovski, Santanu Chatterjee, Jacob Wen...