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    BMCBI
    2006
    129views more  BMCBI 2006»
    Functional clustering of yeast proteins from the protein-protein interaction network
    13 years 10 months ago
    Functional clustering of yeast proteins from the protein-protein interaction network
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    Background: The abundant data available for protein interaction networks have not yet been fully understood. New types of analyses are needed to reveal organizational principles o...
    Taner Z. Sen, Andrzej Kloczkowski, Robert L. Jerni...
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    BMCBI
    2007
    165views more  BMCBI 2007»
    Automatic reconstruction of a bacterial regulatory network using Natural Language Processing
    13 years 10 months ago
    Automatic reconstruction of a bacterial regulatory network using Natural Language Processing
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    Background: Manual curation of biological databases, an expensive and labor-intensive process, is essential for high quality integrated data. In this paper we report the implement...
    Carlos Rodríguez Penagos, Heladia Salgado, ...
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    BMCBI
    2007
    136views more  BMCBI 2007»
    Prediction of tissue-specific cis-regulatory modules using Bayesian networks and regression trees
    13 years 10 months ago
    Prediction of tissue-specific cis-regulatory modules using Bayesian networks and regression trees
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    Background: In vertebrates, a large part of gene transcriptional regulation is operated by cisregulatory modules. These modules are believed to be regulating much of the tissue-sp...
    Xiaoyu Chen, Mathieu Blanchette
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    BMCBI
    2007
    133views more  BMCBI 2007»
    Semi-supervised learning for the identification of syn-expressed genes from fused microarray and in situ image data
    13 years 10 months ago
    Semi-supervised learning for the identification of syn-expressed genes from fused microarray and in situ image data
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    Background: Gene expression measurements during the development of the fly Drosophila melanogaster are routinely used to find functional modules of temporally co-expressed genes. ...
    Ivan G. Costa, Roland Krause, Lennart Opitz, Alexa...
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    BMCBI
    2005
    111views more  BMCBI 2005»
    Improving interoperability between microbial information and sequence databases
    13 years 10 months ago
    Improving interoperability between microbial information and sequence databases
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    Background: Biological resources are essential tools for biomedical research. Their availability is promoted through on-line catalogues. Common Access to Biological Resources and ...
    Paolo Romano, Peter Dawyndt, Francesca Piersigilli...
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