Background: Determining beforehand specific positions to align (anchor points) has proved valuable for the accuracy of automated multiple sequence alignment (MSA) software. This f...
—The ongoing move to chip multiprocessors (CMPs) permits greater sharing of last-level cache by processor cores but this sharing aggravates the cache contention problem, potentia...
Chi Xu, Xi Chen, Robert P. Dick, Zhuoqing Morley M...
Background: With the increased availability of high throughput data, such as DNA microarray data, researchers are capable of producing large amounts of biological data. During the...
Understanding the data structures in a program is crucial to understanding how the program works, or why it doesn't work. Inspecting the code that implements the data structu...
Edward Aftandilian, Sean Kelley, Connor Gramazio, ...
Background: Profile hidden Markov model (HMM) techniques are among the most powerful methods for protein homology detection. Yet, the critical features for successful modelling ar...