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AES
2007
Springer
75views Cryptology» more  AES 2007»
13 years 10 months ago
Improved FVM for two-layer shallow-water models: Application to the Strait of Gibraltar
This paper deals with the numerical simulation of flows of stratified fluids through channels with irregular geometry. Channel crosssections are supposed to be symmetric but no...
Manuel Jose Castro Díaz, José A. Gar...
ALMOB
2008
131views more  ALMOB 2008»
13 years 10 months ago
Fast algorithms for computing sequence distances by exhaustive substring composition
The increasing throughput of sequencing raises growing needs for methods of sequence analysis and comparison on a genomic scale, notably, in connection with phylogenetic tree reco...
Alberto Apostolico, Olgert Denas
ALMOB
2007
74views more  ALMOB 2007»
13 years 10 months ago
Evaluating deterministic motif significance measures in protein databases
Background: Assessing the outcome of motif mining algorithms is an essential task, as the number of reported motifs can be very large. Significance measures play a central role in...
Pedro Gabriel Ferreira, Paulo J. Azevedo
BMCBI
2010
146views more  BMCBI 2010»
13 years 10 months ago
A pairwise residue contact area-based mean force potential for discrimination of native protein structure
Background: Considering energy function to detect a correct protein fold from incorrect ones is very important for protein structure prediction and protein folding. Knowledge-base...
Shahriar Arab, Mehdi Sadeghi, Changiz Eslahchi, Ha...
BMCBI
2010
144views more  BMCBI 2010»
13 years 10 months ago
Finding sRNA generative locales from high-throughput sequencing data with NiBLS
Background: Next-generation sequencing technologies allow researchers to obtain millions of sequence reads in a single experiment. One important use of the technology is the seque...
Daniel MacLean, Vincent Moulton, David J. Studholm...