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» Automated test data generation for aspect-oriented programs
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BMCBI
2008
195views more  BMCBI 2008»
13 years 9 months ago
Goldsurfer2 (Gs2): A comprehensive tool for the analysis and visualization of genome wide association studies
Background: Genome wide association (GWA) studies are now being widely undertaken aiming to find the link between genetic variations and common diseases. Ideally, a well-powered G...
Fredrik Pettersson, Andrew P. Morris, Michael R. B...
BMCBI
2006
93views more  BMCBI 2006»
13 years 9 months ago
Evaluation of absolute quantitation by nonlinear regression in probe-based real-time PCR
Background: In real-time PCR data analysis, the cycle threshold (CT) method is currently the gold standard. This method is based on an assumption of equal PCR efficiency in all re...
Rasmus Goll, Trine Olsen, Guanglin Cui, Jon Florho...
BMCBI
2007
152views more  BMCBI 2007»
13 years 9 months ago
Recodon: Coalescent simulation of coding DNA sequences with recombination, migration and demography
Background: Coalescent simulations have proven very useful in many population genetics studies. In order to arrive to meaningful conclusions, it is important that these simulation...
Miguel Arenas, David Posada
PASTE
2005
ACM
14 years 2 months ago
Generalizing symbolic execution to library classes
Forward symbolic execution is a program analysis technique that allows using symbolic inputs to explore program executions. The traditional applications of this technique have foc...
Sarfraz Khurshid, Yuk Lai Suen
BMCBI
2010
137views more  BMCBI 2010»
13 years 9 months ago
BS Seeker: precise mapping for bisulfite sequencing
Background: Bisulfite sequencing using next generation sequencers yields genome-wide measurements of DNA methylation at single nucleotide resolution. Traditional aligners are not ...
Pao-Yang Chen, Shawn Cokus, Matteo Pellegrini