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BMCBI
2007
165views more  BMCBI 2007»
13 years 7 months ago
Direct maximum parsimony phylogeny reconstruction from genotype data
Background: Maximum parsimony phylogenetic tree reconstruction from genetic variation data is a fundamental problem in computational genetics with many practical applications in p...
Srinath Sridhar, Fumei Lam, Guy E. Blelloch, R. Ra...
VLDB
2007
ACM
128views Database» more  VLDB 2007»
14 years 8 months ago
Periscope/SQ: Interactive Exploration of Biological Sequence Databases
Life science laboratories today have to rely on procedural techniques to store and manage large sequence datasets. Procedural techniques are cumbersome to use and are often very i...
Sandeep Tata, Willis Lang, Jignesh M. Patel
ICASSP
2007
IEEE
14 years 2 months ago
ML Estimation of DNA Initial Copy Number in Polymerase Chain Reaction (PCR) Processes
Estimation of DNA copy number in a given biological sample is an extremely important problem in genomics. This problem is especially challenging when the number of the DNA strands...
Haris Vikalo, Babak Hassibi, Arjang Hassibi
DNA
2005
Springer
118views Bioinformatics» more  DNA 2005»
14 years 1 months ago
Molecular Learning of wDNF Formulae
We introduce a class of generalized DNF formulae called wDNF or weighted disjunctive normal form, and present a molecular algorithm that learns a wDNF formula from training example...
Byoung-Tak Zhang, Ha-Young Jang
GECCO
2004
Springer
106views Optimization» more  GECCO 2004»
14 years 1 months ago
Bluenome: A Novel Developmental Model of Artificial Morphogenesis
The Bluenome Model of Development is introduced. The Bluenome model is a developmental model of Artificial Morphogenesis, inspired by biological development, instantiating a subset...
Taras Kowaliw, Peter Grogono, Nawwaf N. Kharma