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HIPC
2009
Springer
13 years 5 months ago
Comparing the performance of clusters, Hadoop, and Active Disks on microarray correlation computations
Abstract--Microarray-based comparative genomic hybridization (aCGH) offers an increasingly fine-grained method for detecting copy number variations in DNA. These copy number variat...
Jeffrey A. Delmerico, Nathanial A. Byrnes, Andrew ...
VIS
2006
IEEE
128views Visualization» more  VIS 2006»
14 years 9 months ago
Hierarchy-based 3-D Visualization of Homologous Gene Expression across Different Organisms
With the explosive growth of proteomic and expression data of homologous genes, it becomes necessary to explore new methods to visualize and analyze related gene expression data t...
Li Jin, Karl V. Steiner, Carl J. Schmidt, Keith...
KDD
2006
ACM
115views Data Mining» more  KDD 2006»
14 years 8 months ago
Aggregating time partitions
Partitions of sequential data exist either per se or as a result of sequence segmentation algorithms. It is often the case that the same timeline is partitioned in many different ...
Evimaria Terzi, Panayiotis Tsaparas, Taneli Mielik...
RECOMB
2005
Springer
14 years 8 months ago
Predicting Transcription Factor Binding Sites Using Structural Knowledge
Abstract. Current approaches for identification and detection of transcription factor binding sites rely on an extensive set of known target genes. Here we describe a novel structu...
Tommy Kaplan, Nir Friedman, Hanah Margalit
COCOON
2009
Springer
14 years 2 months ago
Determination of Glycan Structure from Tandem Mass Spectra
Glycans are molecules made from simple sugars that form complex tree structures. Glycans constitute one of the most important protein modifications, and identification of glycans...
Sebastian Böcker, Birte Kehr, Florian Rasche