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» Biclustering of Expression Data Using Simulated Annealing
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ICRA
2010
IEEE
225views Robotics» more  ICRA 2010»
13 years 6 months ago
3D reconstruction of fish schooling kinematics from underwater video
This paper describes a probabilistic framework to estimate the shape and position of multiple fish in a school. We model the fish shape as an ellipsoid with a curvature coefficient...
Sachit Butail, Derek A. Paley
BMCBI
2010
135views more  BMCBI 2010»
13 years 8 months ago
Detecting disease associated modules and prioritizing active genes based on high throughput data
Background: The accumulation of high-throughput data greatly promotes computational investigation of gene function in the context of complex biological systems. However, a biologi...
Yu-Qing Qiu, Shi-Hua Zhang, Xiang-Sun Zhang, Luona...
DILS
2004
Springer
14 years 11 days ago
An Ontology-Driven Framework for Data Transformation in Scientific Workflows
Abstract. Ecologists spend considerable effort integrating heterogeneous data for statistical analyses and simulations, for example, to run and test predictive models. Our research...
Shawn Bowers, Bertram Ludäscher
BMCBI
2005
169views more  BMCBI 2005»
13 years 8 months ago
An adaptive method for cDNA microarray normalization
Background: Normalization is a critical step in analysis of gene expression profiles. For duallabeled arrays, global normalization assumes that the majority of the genes on the ar...
Yingdong Zhao, Ming-Chung Li, Richard Simon
BMCBI
2007
197views more  BMCBI 2007»
13 years 8 months ago
Boolean networks using the chi-square test for inferring large-scale gene regulatory networks
Background: Boolean network (BN) modeling is a commonly used method for constructing gene regulatory networks from time series microarray data. However, its major drawback is that...
Haseong Kim, Jae K. Lee, Taesung Park