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    BMCBI
    2008
    134views more  BMCBI 2008»
    Bioinformatic analyses of mammalian 5'-UTR sequence properties of mRNAs predicts alternative translation initiation sites
    13 years 8 months ago
    Bioinformatic analyses of mammalian 5'-UTR sequence properties of mRNAs predicts alternative translation initiation sites
    Download  www.biomedcentral.com
    Background: Utilization of alternative initiation sites for protein translation directed by non-AUG codons in mammalian mRNAs is observed with increasing frequency. Alternative in...
    Jill L. Wegrzyn, Thomas M. Drudge, Faramarz Valafa...
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    JCC
    2002
    94views more  JCC 2002»
    Modern protein force fields behave comparably in molecular dynamics simulations
    13 years 7 months ago
    Modern protein force fields behave comparably in molecular dynamics simulations
    Download  faculty.uml.edu
    : Several molecular dynamics simulations were performed on three proteins--bovine apo-calbindin D9K, human interleukin-4 R88Q mutant, and domain IIA of bacillus subtilis glucose pe...
    Daniel J. Price, Charles L. Brooks III
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    BIBE
    2003
    IEEE
    124views Bioinformatics» more  BIBE 2003»
    Prediction of Contact Maps Using Support Vector Machines
    14 years 1 months ago
    Prediction of Contact Maps Using Support Vector Machines
    Download  glaros.dtc.umn.edu
    Contact map prediction is of great interest for its application in fold recognition and protein 3D structure determination. In this paper we present a contact-map prediction algor...
    Ying Zhao, George Karypis
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    ISSPIT
    2010
    202views Information Technology» more  ISSPIT 2010»
    Accelerating the Nussinov RNA folding algorithm with CUDA/GPU
    13 years 2 months ago
    Accelerating the Nussinov RNA folding algorithm with CUDA/GPU
    Download  bioinformatics.louisville.edu
    Graphics processing units (GPU) on commodity video cards have evolved into powerful computational devices. The RNA secondary structure arises from the primary structure and a backb...
    Dar-Jen Chang, Christopher Kimmer, Ming Ouyang
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    BMCBI
    2007
    128views more  BMCBI 2007»
    Detailed estimation of bioinformatics prediction reliability through the Fragmented Prediction Performance Plots
    13 years 8 months ago
    Detailed estimation of bioinformatics prediction reliability through the Fragmented Prediction Performance Plots
    Download  www.biomedcentral.com
    Background: An important and yet rather neglected question related to bioinformatics predictions is the estimation of the amount of data that is needed to allow reliable predictio...
    Oliviero Carugo
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