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» Bottleneck Detection Using Statistical Intervention Analysis
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BMCBI
2007
114views more  BMCBI 2007»
13 years 7 months ago
False occurrences of functional motifs in protein sequences highlight evolutionary constraints
Background: False occurrences of functional motifs in protein sequences can be considered as random events due solely to the sequence composition of a proteome. Here we use a nume...
Allegra Via, Pier Federico Gherardini, Enrico Ferr...
BMCBI
2004
158views more  BMCBI 2004»
13 years 7 months ago
A novel Mixture Model Method for identification of differentially expressed genes from DNA microarray data
Background: The main goal in analyzing microarray data is to determine the genes that are differentially expressed across two types of tissue samples or samples obtained under two...
Kayvan Najarian, Maryam Zaheri, Ali Ajdari Rad, Si...
BMCBI
2002
89views more  BMCBI 2002»
13 years 7 months ago
Sources of variability and effect of experimental approach on expression profiling data interpretation
Background: We provide a systematic study of the sources of variability in expression profiling data using 56 RNAs isolated from human muscle biopsies (34 Affymetrix MuscleChip ar...
Marina Bakay, Yi-Wen Chen, Rehannah H. A. Borup, P...
KDD
2007
ACM
136views Data Mining» more  KDD 2007»
14 years 8 months ago
Information genealogy: uncovering the flow of ideas in non-hyperlinked document databases
We now have incrementally-grown databases of text documents ranging back for over a decade in areas ranging from personal email, to news-articles and conference proceedings. While...
Benyah Shaparenko, Thorsten Joachims
ICASSP
2007
IEEE
14 years 2 months ago
A Multi-Subject, Dynamic Bayesian Networks (DBNS) Framework for Brain Effective Connectivity
As dynamic connectivity is shown essential for normal brain function and is disrupted in disease, it is critical to develop models for inferring brain effective connectivity from ...
Junning Li, Z. Jane Wang, Martin J. McKeown