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BMCBI
2008
120views more  BMCBI 2008»
13 years 7 months ago
E-CAI: a novel server to estimate an expected value of Codon Adaptation Index (eCAI)
Background: The Codon Adaptation Index (CAI) is a measure of the synonymous codon usage bias for a DNA or RNA sequence. It quantifies the similarity between the synonymous codon u...
Pere Puigbò, Ignacio G. Bravo, Santiago Gar...
CORR
2010
Springer
160views Education» more  CORR 2010»
13 years 7 months ago
Scalable Probabilistic Databases with Factor Graphs and MCMC
Incorporating probabilities into the semantics of incomplete databases has posed many challenges, forcing systems to sacrifice modeling power, scalability, or treatment of relatio...
Michael L. Wick, Andrew McCallum, Gerome Miklau
BMCBI
2007
142views more  BMCBI 2007»
13 years 7 months ago
SABERTOOTH: protein structural alignment based on a vectorial structure representation
Background: The task of computing highly accurate structural alignments of proteins in very short computation time is still challenging. This is partly due to the complexity of pr...
Florian Teichert, Ugo Bastolla, Markus Porto
IJPP
2006
145views more  IJPP 2006»
13 years 7 months ago
Deterministic Parallel Processing
Abstract. In order to address the problems faced in the wireless communications domain, picoChip has devised the picoArrayTM . The picoArrayTM is a tiled-processor architecture, co...
Gajinder Panesar, Daniel Towner, Andrew Duller, Al...
JCB
2008
159views more  JCB 2008»
13 years 7 months ago
BayesMD: Flexible Biological Modeling for Motif Discovery
We present BayesMD, a Bayesian Motif Discovery model with several new features. Three different types of biological a priori knowledge are built into the framework in a modular fa...
Man-Hung Eric Tang, Anders Krogh, Ole Winther