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BMCBI
2008
130views more  BMCBI 2008»
13 years 10 months ago
A novel series of compositionally biased substitution matrices for comparing Plasmodium proteins
Background: The most common substitution matrices currently used (BLOSUM and PAM) are based on protein sequences with average amino acid distributions, thus they do not represent ...
Kevin Brick, Elisabetta Pizzi
BMCBI
2007
168views more  BMCBI 2007»
13 years 10 months ago
GOSim - an R-package for computation of information theoretic GO similarities between terms and gene products
Background: With the increased availability of high throughput data, such as DNA microarray data, researchers are capable of producing large amounts of biological data. During the...
Holger Fröhlich, Nora Speer, Annemarie Poustk...
BMCBI
2007
203views more  BMCBI 2007»
13 years 10 months ago
A Grid-based solution for management and analysis of microarrays in distributed experiments
Several systems have been presented in the last years in order to manage the complexity of large microarray experiments. Although good results have been achieved, most systems ten...
Ivan Porro, Livia Torterolo, Luca Corradi, Marco F...
WWW
2009
ACM
14 years 11 months ago
Automated construction of web accessibility models from transaction click-streams
Screen readers, the dominant assistive technology used by visually impaired people to access the Web, function by speaking out the content of the screen serially. Using screen rea...
Jalal Mahmud, Yevgen Borodin, I. V. Ramakrishnan, ...
KDD
2009
ACM
188views Data Mining» more  KDD 2009»
14 years 11 months ago
Mining discrete patterns via binary matrix factorization
Mining discrete patterns in binary data is important for subsampling, compression, and clustering. We consider rankone binary matrix approximations that identify the dominant patt...
Bao-Hong Shen, Shuiwang Ji, Jieping Ye