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NAR
2007
131views more  NAR 2007»
13 years 7 months ago
CRISPRFinder: a web tool to identify clustered regularly interspaced short palindromic repeats
Clustered regularly interspaced short palindromic repeats (CRISPRs) constitute a particular family of tandem repeats found in a wide range of prokaryotic genomes (half of eubacter...
Ibtissem Grissa, Gilles Vergnaud, Christine Pource...
BMCBI
2007
133views more  BMCBI 2007»
13 years 8 months ago
MATLIGN: a motif clustering, comparison and matching tool
Background: Sequence motifs representing transcription factor binding sites (TFBS) are commonly encoded as position frequency matrices (PFM) or degenerate consensus sequences (CS)...
Matti Kankainen, Ari Löytynoja
CORR
2008
Springer
113views Education» more  CORR 2008»
13 years 8 months ago
Document stream clustering: experimenting an incremental algorithm and AR-based tools for highlighting dynamic trends
We address here two major challenges presented by dynamic data mining: 1) the stability challenge: we have implemented a rigorous incremental density-based clustering algorithm, i...
Alain Lelu, Martine Cadot, Pascal Cuxac
QEST
2007
IEEE
14 years 2 months ago
Cluster Grid based Response-time analysis module for the PIPE Tool
Generalized Stochastic Petri Nets (GSPNs) are a widely used high-level formalism used for modelling discrete-event systems. The Platform Independent Petri net Editor (PIPE) is an ...
Harini Kulatunga, Ashok Argent-Katwala, William J....
BIOINFORMATICS
2006
85views more  BIOINFORMATICS 2006»
13 years 8 months ago
Clusterv: a tool for assessing the reliability of clusters discovered in DNA microarray data
Summary: We present a new R package for the assessment of the reliability of clusters discovered in high dimensional DNA microarray data. The package implements methods based on r...
Giorgio Valentini