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BIBE
2007
IEEE
195views Bioinformatics» more  BIBE 2007»
14 years 4 months ago
Finding Clusters of Positive and Negative Coregulated Genes in Gene Expression Data
— In this paper, we propose a system for finding partial positive and negative coregulated gene clusters in microarray data. Genes are clustered together if they show the same p...
Kerstin Koch, Stefan Schönauer, Ivy Jansen, J...
BMCBI
2007
148views more  BMCBI 2007»
13 years 10 months ago
Evaluation of gene-expression clustering via mutual information distance measure
Background: The definition of a distance measure plays a key role in the evaluation of different clustering solutions of gene expression profiles. In this empirical study we compa...
Ido Priness, Oded Maimon, Irad E. Ben-Gal
BMCBI
2010
148views more  BMCBI 2010»
13 years 10 months ago
Structuring heterogeneous biological information using fuzzy clustering of k-partite graphs
Background: Extensive and automated data integration in bioinformatics facilitates the construction of large, complex biological networks. However, the challenge lies in the inter...
Mara L. Hartsperger, Florian Blöchl, Volker S...
KDD
2004
ACM
145views Data Mining» more  KDD 2004»
14 years 10 months ago
Mining coherent gene clusters from gene-sample-time microarray data
Extensive studies have shown that mining microarray data sets is important in bioinformatics research and biomedical applications. In this paper, we explore a novel type of genesa...
Daxin Jiang, Jian Pei, Murali Ramanathan, Chun Tan...
CLUSTER
2000
IEEE
14 years 2 months ago
SilkRoad: A Multithreaded Runtime System with Software Distributed Shared Memory for SMP Clusters
Multithreaded parallel system with software Distributed Shared Memory (DSM) is an attractive direction in cluster computing. In these systems, distributing workloads and keeping t...
Liang Peng, Weng-Fai Wong, Ming-Dong Feng, Chung-K...