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» Clustering by Random Projections
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BMCBI
2006
101views more  BMCBI 2006»
15 years 3 months ago
How repetitive are genomes?
Background: Genome sequences vary strongly in their repetitiveness and the causes for this are still debated. Here we propose a novel measure of genome repetitiveness, the index o...
Bernhard Haubold, Thomas Wiehe
131
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BMCBI
2006
116views more  BMCBI 2006»
15 years 3 months ago
Whole genome association mapping by incompatibilities and local perfect phylogenies
Background: With current technology, vast amounts of data can be cheaply and efficiently produced in association studies, and to prevent data analysis to become the bottleneck of ...
Thomas Mailund, Søren Besenbacher, Mikkel H...
134
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BMCBI
2007
202views more  BMCBI 2007»
15 years 3 months ago
ProtNet: a tool for stochastic simulations of protein interaction networks dynamics
Background: Protein interactions support cell organization and mediate its response to any specific stimulus. Recent technological advances have produced large data-sets that aim ...
Massimo Bernaschi, Filippo Castiglione, Alessandra...
133
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JGS
2006
113views more  JGS 2006»
15 years 3 months ago
Pattern based map comparisons
Map comparison techniques based on a pixel-by-pixel comparison are useful for many purposes, but fail to reveal important aspects of map similarities and differences. In contrast, ...
Roger White
BMCBI
2005
106views more  BMCBI 2005»
15 years 3 months ago
A multistep bioinformatic approach detects putative regulatory elements in gene promoters
Background: Searching for approximate patterns in large promoter sequences frequently produces an exceedingly high numbers of results. Our aim was to exploit biological knowledge ...
Stefania Bortoluzzi, Alessandro Coppe, Andrea Biso...