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JCP
2006
157views more  JCP 2006»
13 years 6 months ago
CF-GeNe: Fuzzy Framework for Robust Gene Regulatory Network Inference
Most Gene Regulatory Network (GRN) studies ignore the impact of the noisy nature of gene expression data despite its significant influence upon inferred results. This paper present...
Muhammad Shoaib B. Sehgal, Iqbal Gondal, Laurence ...
RECOMB
2002
Springer
14 years 7 months ago
Phase-independent rhythmic analysis of genome-wide expression patterns
We introduce a model-based analysis technique for extracting and characterizing rhythmic expression pro les from genome-wide DNA microarray hybridization data. These patterns are ...
Christopher James Langmead, Anthony K. Yan, C. Rob...
STACS
2007
Springer
14 years 25 days ago
Small Space Representations for Metric Min-Sum k -Clustering and Their Applications
The min-sum k-clustering problem is to partition a metric space (P, d) into k clusters C1, . . . , Ck ⊆ P such that k i=1 p,q∈Ci d(p, q) is minimized. We show the first effi...
Artur Czumaj, Christian Sohler
BMCBI
2005
106views more  BMCBI 2005»
13 years 6 months ago
ESTree db: a Tool for Peach Functional Genomics
Background: The ESTree db http://www.itb.cnr.it/estree/ represents a collection of Prunus persica expressed sequenced tags (ESTs) and is intended as a resource for peach functiona...
Barbara Lazzari, Andrea Caprera, Alberto Vecchiett...
GECCO
2005
Springer
156views Optimization» more  GECCO 2005»
14 years 7 days ago
Extraction of informative genes from microarray data
Identification of those genes that might anticipate the clinical behavior of different types of cancers is challenging due to availability of a smaller number of patient samples...
Topon Kumar Paul, Hitoshi Iba