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BMCBI
2006
161views more  BMCBI 2006»
13 years 7 months ago
Comparative genomics in cyprinids: common carp ESTs help the annotation of the zebrafish genome
Background: Automatic annotation of sequenced eukaryotic genomes integrates a combination of methodologies such as ab-initio methods and alignment of homologous genes and/or prote...
Alan Christoffels, Richard Bartfai, Hamsa Srinivas...
DSS
2006
184views more  DSS 2006»
13 years 7 months ago
Building a scientific knowledge web portal: The NanoPort experience
There has been a tremendous growth in the amount of information and resources on the World Wide Web that are useful to researchers and practitioners in science domains. While the ...
Michael Chau, Zan Huang, Jialun Qin, Yilu Zhou, Hs...
BMCBI
2007
120views more  BMCBI 2007»
13 years 7 months ago
Transcript-based redefinition of grouped oligonucleotide probe sets using AceView: High-resolution annotation for microarrays
Background: Extracting biological information from high-density Affymetrix arrays is a multi-step process that begins with the accurate annotation of microarray probes. Shortfalls...
Jun Lu, Joseph C. Lee, Marc L. Salit, Margaret C. ...
SIGARCH
2008
73views more  SIGARCH 2008»
13 years 7 months ago
Servo: a programming model for many-core computing
Conventional programming models were designed to be used by expert programmers for programming for largescale multiprocessors, distributed computational clusters, or specialized p...
Nicolas Zea, John Sartori, Rakesh Kumar
SP
2008
IEEE
122views Security Privacy» more  SP 2008»
13 years 7 months ago
Large-scale phylogenetic analysis on current HPC architectures
Abstract. Phylogenetic inference is considered a grand challenge in Bioinformatics due to its immense computational requirements. The increasing popularity and availability of larg...
Michael Ott, Jaroslaw Zola, Srinivas Aluru, Andrew...