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» Clustering the annotation space of proteins
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BMCBI
2006
161views more  BMCBI 2006»
13 years 9 months ago
Comparative genomics in cyprinids: common carp ESTs help the annotation of the zebrafish genome
Background: Automatic annotation of sequenced eukaryotic genomes integrates a combination of methodologies such as ab-initio methods and alignment of homologous genes and/or prote...
Alan Christoffels, Richard Bartfai, Hamsa Srinivas...
BMCBI
2006
181views more  BMCBI 2006»
13 years 9 months ago
Array2BIO: from microarray expression data to functional annotation of co-regulated genes
Background: There are several isolated tools for partial analysis of microarray expression data. To provide an integrative, easy-to-use and automated toolkit for the analysis of A...
Gabriela G. Loots, Patrick S. G. Chain, Shalini Ma...
BMCBI
2007
124views more  BMCBI 2007»
13 years 9 months ago
Protein structural similarity search by Ramachandran codes
Background: Protein structural data has increased exponentially, such that fast and accurate tools are necessary to access structure similarity search. To improve the search speed...
Wei-Cheng Lo, Po-Jung Huang, Chih-Hung Chang, Ping...
GCB
2006
Springer
99views Biometrics» more  GCB 2006»
14 years 20 days ago
Shape Distributions and Protein Similarity
: In this paper we describe a similarity model that provides the objective basis for clustering proteins of similar structure. More specifically, we consider the following variant ...
Stefan Canzar, Jan Remy
CIVR
2008
Springer
222views Image Analysis» more  CIVR 2008»
13 years 10 months ago
Automatic image annotation via local multi-label classification
As the consequence of semantic gap, visual similarity does not guarantee semantic similarity, which in general is conflicting with the inherent assumption of many generativebased ...
Mei Wang, Xiangdong Zhou, Tat-Seng Chua