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    BMCBI
    2007
    99views more  BMCBI 2007»
    The Deuterator: software for the determination of backbone amide deuterium levels from H/D exchange MS data
    13 years 9 months ago
    The Deuterator: software for the determination of backbone amide deuterium levels from H/D exchange MS data
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    Background: The combination of mass spectrometry and solution phase amide hydrogen/deuterium exchange (H/D exchange) experiments is an effective method for characterizing protein ...
    B. D. Pascal, M. J. Chalmers, S. A. Busby, C. C. M...
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    BMCBI
    2008
    111views more  BMCBI 2008»
    GENOMEPOP: A program to simulate genomes in populations
    13 years 9 months ago
    GENOMEPOP: A program to simulate genomes in populations
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    Background: There are several situations in population biology research where simulating DNA sequences is useful. Simulation of biological populations under different evolutionary...
    Antonio Carvajal-Rodríguez
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    BMCBI
    2007
    181views more  BMCBI 2007»
    Versatile annotation and publication quality visualization of protein complexes using POLYVIEW-3D
    13 years 9 months ago
    Versatile annotation and publication quality visualization of protein complexes using POLYVIEW-3D
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    Background: Macromolecular visualization as well as automated structural and functional annotation tools play an increasingly important role in the post-genomic era, contributing ...
    Aleksey A. Porollo, Jaroslaw Meller
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    BMCBI
    2008
    115views more  BMCBI 2008»
    Principal components analysis based methodology to identify differentially expressed genes in time-course microarray data
    13 years 9 months ago
    Principal components analysis based methodology to identify differentially expressed genes in time-course microarray data
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    Background: Time-course microarray experiments are being increasingly used to characterize dynamic biological processes. In these experiments, the goal is to identify genes differ...
    Sudhakar Jonnalagadda, Rajagopalan Srinivasan
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    BMCBI
    2008
    126views more  BMCBI 2008»
    c-REDUCE: Incorporating sequence conservation to detect motifs that correlate with expression
    13 years 9 months ago
    c-REDUCE: Incorporating sequence conservation to detect motifs that correlate with expression
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    Background: Computational methods for characterizing novel transcription factor binding sites search for sequence patterns or "motifs" that appear repeatedly in genomic ...
    Katerina Kechris, Hao Li
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