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    BMCBI
    2008
    126views more  BMCBI 2008»
    c-REDUCE: Incorporating sequence conservation to detect motifs that correlate with expression
    13 years 7 months ago
    c-REDUCE: Incorporating sequence conservation to detect motifs that correlate with expression
    Download  www.biomedcentral.com
    Background: Computational methods for characterizing novel transcription factor binding sites search for sequence patterns or "motifs" that appear repeatedly in genomic ...
    Katerina Kechris, Hao Li
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    CSB
    2005
    IEEE
    189views Bioinformatics» more  CSB 2005»
    Learning Yeast Gene Functions from Heterogeneous Sources of Data Using Hybrid Weighted Bayesian Networks
    14 years 1 months ago
    Learning Yeast Gene Functions from Heterogeneous Sources of Data Using Hybrid Weighted Bayesian Networks
    Download  conferences.computer.org
    We developed a machine learning system for determining gene functions from heterogeneous sources of data sets using a Weighted Naive Bayesian Network (WNB). The knowledge of gene ...
    Xutao Deng, Huimin Geng, Hesham H. Ali
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    BIOINFORMATICS
    2007
    74views more  BIOINFORMATICS 2007»
    Simultaneous alignment and annotation of cis-regulatory regions
    13 years 7 months ago
    Simultaneous alignment and annotation of cis-regulatory regions
    Download  cmb.molgen.mpg.de
    Genomic transcriptional processes rely heavily on the combinatorial binding of transcription factors on the upstream regions of genes. Analysis and complete characterization of su...
    Abha Singh Bais, Steffen Grossmann, Martin Vingron
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    BMCBI
    2006
    108views more  BMCBI 2006»
    Gene function classification using Bayesian models with hierarchy-based priors
    13 years 7 months ago
    Gene function classification using Bayesian models with hierarchy-based priors
    Download  www.cs.utoronto.ca
    We investigate the application of hierarchical classification schemes to the annotation of gene function based on several characteristics of protein sequences including phylogenic ...
    Babak Shahbaba, Radford M. Neal
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    BMCBI
    2006
    74views more  BMCBI 2006»
    An unsupervised classification scheme for improving predictions of prokaryotic TIS
    13 years 7 months ago
    An unsupervised classification scheme for improving predictions of prokaryotic TIS
    Download  www.biomedcentral.com
    Background: Although it is not difficult for state-of-the-art gene finders to identify coding regions in prokaryotic genomes, exact prediction of the corresponding translation ini...
    Maike Tech, Peter Meinicke
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