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» Comparative Evaluation of Microarray-based Gene Expression D...
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BMCBI
2007
157views more  BMCBI 2007»
13 years 9 months ago
Improving gene set analysis of microarray data by SAM-GS
Background: Gene-set analysis evaluates the expression of biological pathways, or a priori defined gene sets, rather than that of individual genes, in association with a binary ph...
Irina Dinu, John D. Potter, Thomas Mueller, Qi Liu...
NAR
2006
89views more  NAR 2006»
13 years 9 months ago
New Onto-Tools: Promoter-Express, nsSNPCounter and Onto-Translate
The Onto-Tools suite is composed of an annotation database and eight complementary, web-accessible data mining tools: Onto-Express, Onto-Compare, Onto-Design, Onto-Translate, Onto...
Purvesh Khatri, Valmik Desai, Adi L. Tarca, Sivaku...
NAR
2011
215views Computer Vision» more  NAR 2011»
12 years 12 months ago
LSD: a leaf senescence database
By broad literature survey, we have developed a leaf senescence database (LSD, http://www .eplantsenescence.org/) that contains a total of 1145 senescence associated genes (SAGs) ...
Xiao-Chuan Liu, Zhonghai Li, Zhiqiang Jiang, Yi Zh...
AINA
2008
IEEE
14 years 3 months ago
Missing Value Estimation for Time Series Microarray Data Using Linear Dynamical Systems Modeling
The analysis of gene expression time series obtained from microarray experiments can be effectively exploited to understand a wide range of biological phenomena from the homeostat...
Connie Phong, Raul Singh
SIGMOD
2010
ACM
149views Database» more  SIGMOD 2010»
13 years 3 months ago
On models and query languages for probabilistic processes
Probabilistic processes appear naturally in various contexts, with applications to Business Processes, XML data management and more. Many models for specifying and querying such p...
Daniel Deutch, Tova Milo