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» Comparative evaluation of gene-set analysis methods
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ICDM
2003
IEEE
153views Data Mining» more  ICDM 2003»
14 years 2 months ago
Dimensionality Reduction Using Kernel Pooled Local Discriminant Information
We study the use of kernel subspace methods for learning low-dimensional representations for classification. We propose a kernel pooled local discriminant subspace method and com...
Peng Zhang, Jing Peng, Carlotta Domeniconi
BMCBI
2004
208views more  BMCBI 2004»
13 years 8 months ago
Hybrid clustering for microarray image analysis combining intensity and shape features
Background: Image analysis is the first crucial step to obtain reliable results from microarray experiments. First, areas in the image belonging to single spots have to be identif...
Jörg Rahnenführer, Daniel Bozinov
ENVSOFT
2006
125views more  ENVSOFT 2006»
13 years 8 months ago
Sensitivity analysis based on regional splits and regression trees (SARS-RT)
A global sensitivity analysis with regional properties is introduced. This method is demonstrated on two synthetic and one hydraulic example. It can be shown that an uncertainty a...
Florian Pappenberger, Ion Iorgulescu, Keith J. Bev...
BMCBI
2005
163views more  BMCBI 2005»
13 years 8 months ago
Rank-invariant resampling based estimation of false discovery rate for analysis of small sample microarray data
Background: The evaluation of statistical significance has become a critical process in identifying differentially expressed genes in microarray studies. Classical p-value adjustm...
Nitin Jain, HyungJun Cho, Michael O'Connell, Jae K...
NAR
2010
129views more  NAR 2010»
13 years 3 months ago
PROSESS: a protein structure evaluation suite and server
PROSESS (PROtein Structure Evaluation Suite and Server) is a web server designed to evaluate and validate protein structures generated by X-ray crystallography, NMR spectroscopy o...
Mark V. Berjanskii, Yongjie Liang, Jianjun Zhou, P...