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    ICGA
    1997
    122views Optimization» more  ICGA 1997»
    A Comparison of Global and Local Search Methods in Drug Docking
    13 years 9 months ago
    A Comparison of Global and Local Search Methods in Drug Docking
    Download  array.bioengr.uic.edu
    Molecular docking software makes computational predictions of the interaction of molecules. This can be useful, for example, in evaluating the binding of candidate drug molecules ...
    Christopher D. Rosin, R. Scott Halliday, William E...
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    WSC
    1998
    146views Modeling And Simulation» more  WSC 1998»
    Parallel Implementation of a Molecular Dynamics Simulation Program
    13 years 9 months ago
    Parallel Implementation of a Molecular Dynamics Simulation Program
    Download  www.informs-sim.org
    We have taken a NIST molecular dynamics simulation program (md3), which was configured as a single sequential process running on a CRAY C90 vector supercomputer, and parallelized ...
    Alan Mink, Christophe Bailly
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    SOSP
    1997
    ACM
    129views Operating System» more  SOSP 1997»
    Cashmere-2L: Software Coherent Shared Memory on a Clustered Remote-Write Network
    13 years 9 months ago
    Cashmere-2L: Software Coherent Shared Memory on a Clustered Remote-Write Network
    Download  www.cs.rochester.edu
    Low-latency remote-write networks, such as DEC’s Memory Channel, provide the possibility of transparent, inexpensive, large-scale shared-memory parallel computing on clusters of...
    Robert Stets, Sandhya Dwarkadas, Nikos Hardavellas...
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    WSC
    1997
    80views Modeling And Simulation» more  WSC 1997»
    Multiplexed State Saving for Bounded Rollback
    13 years 9 months ago
    Multiplexed State Saving for Bounded Rollback
    Download  www.informs-sim.org
    Optimistic parallel discrete event simulation (PDES) uses a state history trail to support rollback. State saving strategies range from making a complete copy of a model’s state...
    Fabian Gomes, Brian Unger, John G. Cleary, Steve F...
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    ISMB
    1994
    121views Computational Biology» more  ISMB 1994»
    Stochastic Motif Extraction Using Hidden Markov Model
    13 years 9 months ago
    Stochastic Motif Extraction Using Hidden Markov Model
    Download  www.aaai.org
    In this paper, westudy the application of an ttMM(hidden Markov model) to the problem of representing protein sequencesby a stochastic motif. Astochastic protein motif represents ...
    Yukiko Fujiwara, Minoru Asogawa, Akihiko Konagaya
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