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IPPS
2009
IEEE
14 years 2 months ago
Implementing protein seed-based comparison algorithm on the SGI RASC-100 platform
This paper describes a parallel FPGA implementation of a genomic sequence comparison algorithm for finding similarities between a large set of protein sequences and full genomes....
Van Hoa Nguyen, Alexandre Cornu, Dominique Lavenie...
IDA
2008
Springer
13 years 7 months ago
Transcription factor binding site recognition by regularity matrices based on the natural classification method
A principally new approach to the classifications of nucleotide sequences based on the "natural" classification concept is proposed. As a result of "natural" c...
Eugenii E. Vityaev, K. A. Lapardin, I. V. Khomiche...
BMCBI
2007
126views more  BMCBI 2007»
13 years 7 months ago
Multiple non-collinear TF-map alignments of promoter regions
Background: The analysis of the promoter sequence of genes with similar expression patterns is a basic tool to annotate common regulatory elements. Multiple sequence alignments ar...
Enrique Blanco, Roderic Guigó, Xavier Messe...
CVPR
2003
IEEE
14 years 9 months ago
Video-Based Face Recognition Using Adaptive Hidden Markov Models
While traditional face recognition is typically based on still images, face recognition from video sequences has become popular recently. In this paper, we propose to use adaptive...
Xiaoming Liu 0002, Tsuhan Chen
BMEI
2008
IEEE
14 years 2 months ago
A New Approach for Tree Alignment Based on Local Re-Optimization
Multiple sequence alignment is the most fundamental task in bioinformatics and computational biology. In this paper, we present a new algorithm to conduct multiple sequences align...
Feng Yue, Jijun Tang