Sciweavers

2345 search results - page 32 / 469
» Comparing sequence scaffolds
Sort
View
BMCBI
2008
99views more  BMCBI 2008»
13 years 7 months ago
Binning sequences using very sparse labels within a metagenome
Background: In metagenomic studies, a process called binning is necessary to assign contigs that belong to multiple species to their respective phylogenetic groups. Most of the cu...
Chon-Kit Kenneth Chan, Arthur L. Hsu, Saman K. Hal...
NAR
2006
128views more  NAR 2006»
13 years 7 months ago
Expresso: automatic incorporation of structural information in multiple sequence alignments using 3D-Coffee
Expresso is a multiple sequence alignment server that aligns sequences using structural information. The user only needs to provide sequences. The server runs BLAST to identify cl...
Fabrice Armougom, Sébastien Moretti, Olivie...
SIGPRO
2008
104views more  SIGPRO 2008»
13 years 7 months ago
Macromolecular sequence analysis using multiwindow Gabor representations
Multiwindow Gabor representations highlight fingerprints suitable for indexing of macromolecules, based on their local periodic structures. This paper presents a technique for ana...
Nagesh K. Subbanna, Yehoshua Y. Zeevi
CONCUR
2012
Springer
11 years 10 months ago
MSO Decidability of Multi-Pushdown Systems via Split-Width
Abstract. Multi-threaded programs with recursion are naturally modeled as multi-pushdown systems. The behaviors are represented as multiply nested words (MNWs), which are words enr...
Aiswarya Cyriac, Paul Gastin, K. Narayan Kumar
AADEBUG
2005
Springer
14 years 1 months ago
Lightweight bug localization with AMPLE
AMPLE locates likely failure-causing classes by comparing method call sequences of passing and failing runs. A difference in method call sequences, such as multiple deallocation ...
Valentin Dallmeier, Christian Lindig, Andreas Zell...