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BMCBI
2008
200views more  BMCBI 2008»
13 years 8 months ago
Defining functional distances over Gene Ontology
Background: A fundamental problem when trying to define the functional relationships between proteins is the difficulty in quantifying functional similarities, even when well-stru...
Angela del Pozo, Florencio Pazos, Alfonso Valencia
ISMIR
2004
Springer
124views Music» more  ISMIR 2004»
14 years 2 months ago
A Comparison of Rhythmic Similarity Measures
Measuring the similarity between rhythms is a fundamental problem in computational music theory, with many applications such as music information retrieval and copyright infringem...
Godfried T. Toussaint
CIAC
2010
Springer
376views Algorithms» more  CIAC 2010»
14 years 6 months ago
Kernelization for Maximum Leaf Spanning Tree with Positive Vertex Weights
In this paper we consider a natural generalization of the well-known Max Leaf Spanning Tree problem. In the generalized Weighted Max Leaf problem we get as input an undirected co...
Bart Jansen
RECOMB
2007
Springer
14 years 9 months ago
QNet: A Tool for Querying Protein Interaction Networks
Molecular interaction databases can be used to study the evolution of molecular pathways across species. Querying such pathways is a challenging computational problem, and recent e...
Banu Dost, Tomer Shlomi, Nitin Gupta 0002, Eytan R...
CIKM
2006
Springer
14 years 14 days ago
Heuristic containment check of partial tree-pattern queries in the presence of index graphs
The wide adoption of XML has increased the interest of the database community on tree-structured data management techniques. Querying capabilities are provided through tree-patter...
Dimitri Theodoratos, Stefanos Souldatos, Theodore ...