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» Complexity and Performance in Parallel Programming Languages
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BMCBI
2010
175views more  BMCBI 2010»
13 years 8 months ago
Towards high performance computing for molecular structure prediction using IBM Cell Broadband Engine - an implementation perspe
Background: RNA structure prediction problem is a computationally complex task, especially with pseudo-knots. The problem is well-studied in existing literature and predominantly ...
S. P. T. Krishnan, Sim Sze Liang, Bharadwaj Veerav...
PPDP
2010
Springer
13 years 7 months ago
Graph queries through datalog optimizations
This paperdescribes the use of a powerful graph query language for querying programs, and a novel combination of transformations for generating efficient implementations of the q...
K. Tuncay Tekle, Michael Gorbovitski, Yanhong A. L...
IPPS
2005
IEEE
14 years 2 months ago
Automatic Support for Irregular Computations in a High-Level Language
The problem of writing high performance parallel applications becomes even more challenging when irregular, sparse or adaptive methods are employed. In this paper we introduce com...
Jimmy Su, Katherine A. Yelick
TSMC
1998
62views more  TSMC 1998»
13 years 8 months ago
Performance based design of high-level language-directed computer architectures
— This paper is concerned with the analytical modeling of computer architectures to aid in the design of high-level language-directed computer architectures. High-level language-...
Rajendra S. Katti, Mark L. Manwaring
PLDI
2010
ACM
14 years 1 days ago
Composing Parallel Software Efficiently with Lithe
Applications composed of multiple parallel libraries perform poorly when those libraries interfere with one another by obliviously using the same physical cores, leading to destru...
Heidi Pan, Benjamin Hindman, Krste Asanovic