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ATAL
2003
Springer
14 years 1 months ago
A multi-agent system for the quantitative simulation of biological networks
We apply the multi-agent system (MAS) platform to the task of biological network simulation. In this paper, we describe the simulation of signal transduction (ST) networks using t...
Salim Khan, Ravi Makkena, Foster McGeary, Keith S....
AIME
2007
Springer
14 years 2 months ago
A Human-Machine Cooperative Approach for Time Series Data Interpretation
Abstract. This paper deals with the interpretation of biomedical multivariate time series for extracting typical scenarios. This task is known to be difficult, due to the temporal ...
Thomas Guyet, Catherine Garbay, Michel Dojat
BMCBI
2007
158views more  BMCBI 2007»
13 years 8 months ago
Penalized likelihood for sparse contingency tables with an application to full-length cDNA libraries
Background: The joint analysis of several categorical variables is a common task in many areas of biology, and is becoming central to systems biology investigations whose goal is ...
Corinne Dahinden, Giovanni Parmigiani, Mark C. Eme...
BMCBI
2010
142views more  BMCBI 2010»
13 years 8 months ago
Classification of protein sequences by means of irredundant patterns
Background: The classification of protein sequences using string algorithms provides valuable insights for protein function prediction. Several methods, based on a variety of diff...
Matteo Comin, Davide Verzotto
ECAL
2003
Springer
14 years 1 months ago
Multi-agent Model of Biological Swarming
An agent-based approach is used to explain the formation of vortex swarms in biological systems. The dynamics of the multiagent system is described by 3N coupled equations, modeli...
Robert Mach, Frank Schweitzer