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RECOMB
2009
Springer
14 years 2 months ago
Counting All DCJ Sorting Scenarios
In genome rearrangements, the double cut and join (DCJ) operation, introduced by Yancopoulos et al., allows to represent most rearrangement events that could happen in multichromos...
Marília D. V. Braga, Jens Stoye
BMCBI
2007
145views more  BMCBI 2007»
13 years 7 months ago
Improved benchmarks for computational motif discovery
Background: An important step in annotation of sequenced genomes is the identification of transcription factor binding sites. More than a hundred different computational methods h...
Geir Kjetil Sandve, Osman Abul, Vegard Walseng, Fi...
CVPR
2004
IEEE
14 years 9 months ago
Approximation of Canonical Sets and Their Applications to 2D View Simplification
Given a set of patterns and a similarity measure between them, we will present an optimization framework to approximate a small subset, known as a canonical set, whose members clo...
Trip Denton, Jeff Abrahamson, Ali Shokoufandeh
HEURISTICS
2002
122views more  HEURISTICS 2002»
13 years 7 months ago
Complete Local Search with Memory
Neighborhood search heuristics like local search and its variants are some of the most popular approaches to solve discrete optimization problems of moderate to large size. Apart ...
Diptesh Ghosh, Gerard Sierksma
JMLR
2010
182views more  JMLR 2010»
13 years 2 months ago
Quadratic Programming Feature Selection
Identifying a subset of features that preserves classification accuracy is a problem of growing importance, because of the increasing size and dimensionality of real-world data se...
Irene Rodriguez-Lujan, Ramón Huerta, Charle...