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» Constraint Based Methods for Biological Sequence Analysis
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BMCBI
2006
137views more  BMCBI 2006»
15 years 4 months ago
Chaos game representation for comparison of whole genomes
Background: Chaos game representation of genome sequences has been used for visual representation of genome sequence patterns as well as alignment-free comparisons of sequences ba...
Jijoy Joseph, Roschen Sasikumar
WCNC
2010
IEEE
15 years 2 months ago
Robust Relay Precoder Design for MIMO-Relay Networks
Abstract—In this paper, we consider a robust design of MIMOrelay precoder and receive filter for the destination nodes in a non-regenerative multiple-input multiple-output (MIMO...
P. Ubaidulla, Ananthanarayanan Chockalingam
BMCBI
2007
107views more  BMCBI 2007»
15 years 4 months ago
Linking microarray reporters with protein functions
Background: The analysis of microarray experiments requires accurate and up-to-date functional annotation of the microarray reporters to optimize the interpretation of the biologi...
Stan Gaj, Arie van Erk, Rachel I. M. van Haaften, ...
BMCBI
2008
95views more  BMCBI 2008»
15 years 4 months ago
Gene set analyses for interpreting microarray experiments on prokaryotic organisms
Background: Despite the widespread usage of DNA microarrays, questions remain about how best to interpret the wealth of gene-by-gene transcriptional levels that they measure. Rece...
Nathan L. Tintle, Aaron A. Best, Matthew DeJongh, ...
RECOMB
2004
Springer
16 years 4 months ago
Designing multiple simultaneous seeds for DNA similarity search
The challenge of similarity search in massive DNA sequence databases has inspired major changes in BLAST-style alignment tools, which accelerate search by inspecting only pairs of...
Yanni Sun, Jeremy Buhler