309 search results - page 32 / 62 » Contextual alignment of biological sequences |
RECOMB
2006
Springer
14 years 8 months ago
2006
Springer
In this paper, we address the problem of discovering novel non-coding RNA (ncRNA) using primary sequence, and secondary structure conservation, focusing on ncRNA families with pseu...
RECOMB
2005
Springer
14 years 8 months ago
2005
Springer
The multiple species de novo gene prediction problem can be stated as follows: given an alignment of genomic sequences from two or more organisms, predict the location and structur...
TCBB
2008
13 years 7 months ago
2008
Abstract-- The trans-genomic query (TGQ) problem -- enabling the free query of biological information, even across genomes -- is a central challenge facing bioinformatics. Solution...
BMCBI
2007
13 years 7 months ago
2007
Background: Remote homology detection is a challenging problem in Bioinformatics. Arguably, profile Hidden Markov Models (pHMMs) are one of the most successful approaches in addre...
SIGMOD
2004
ACM
14 years 7 months ago
2004
ACM
Growing interest in genomic research has resulted in the creation of huge biological sequence databases. In this paper, we present a hash-based pier model for efficient homology s...