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» Data Management for High-Throughput Genomics
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BMCBI
2010
138views more  BMCBI 2010»
13 years 7 months ago
A database and API for variation, dense genotyping and resequencing data
Background: Advances in sequencing and genotyping technologies are leading to the widespread availability of multi-species variation data, dense genotype data and large-scale rese...
Daniel Rios, William M. McLaren, Yuan Chen, Ewan B...
BMCBI
2007
135views more  BMCBI 2007»
13 years 7 months ago
DAVID Knowledgebase: a gene-centered database integrating heterogeneous gene annotation resources to facilitate high-throughput
Background: Due to the complex and distributed nature of biological research, our current biological knowledge is spread over many redundant annotation databases maintained by man...
Brad T. Sherman, Da Wei Huang, Qina Tan, Yongjian ...
BIOINFORMATICS
2004
90views more  BIOINFORMATICS 2004»
13 years 7 months ago
GDPC: connecting researchers with multiple integrated data sources
Summary: The goal of this project is to simplify access to genomic diversity and phenotype data, thereby encouraging reuse of this data. The Genomic Diversity and Phenotype Connec...
Terry M. Casstevens, Edward S. Buckler
BMCBI
2008
124views more  BMCBI 2008»
13 years 7 months ago
RPPAML/RIMS: A metadata format and an information management system for reverse phase protein arrays
Background: Reverse Phase Protein Arrays (RPPA) are convenient assay platforms to investigate the presence of biomarkers in tissue lysates. As with other high-throughput technolog...
Romesh Stanislaus, Mark Carey, Helena F. Deus, Kev...
SCFBM
2008
104views more  SCFBM 2008»
13 years 7 months ago
A Perl toolkit for LIMS development
Background: High throughput laboratory techniques generate huge quantities of scientific data. Laboratory Information Management Systems (LIMS) are a necessary requirement, dealin...
James A. Morris, Simon A. Gayther, Ian J. Jacobs, ...