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» Data Quality in Genome Databases
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BMCBI
2008
99views more  BMCBI 2008»
13 years 7 months ago
Exhaustive prediction of disease susceptibility to coding base changes in the human genome
Background: Single Nucleotide Polymorphisms (SNPs) are the most abundant form of genomic variation and can cause phenotypic differences between individuals, including diseases. Ba...
Vinayak Kulkarni, Mounir Errami, Robert Barber, Ha...
BMCBI
2005
169views more  BMCBI 2005»
13 years 7 months ago
MAPPER: a search engine for the computational identification of putative transcription factor binding sites in multiple genomes
Background: Cis-regulatory modules are combinations of regulatory elements occurring in close proximity to each other that control the spatial and temporal expression of genes. Th...
Voichita D. Marinescu, Isaac S. Kohane, Alberto Ri...
ICDE
2007
IEEE
190views Database» more  ICDE 2007»
13 years 11 months ago
CPS-tree: A Compact Partitioned Suffix Tree for Disk-based Indexing on Large Genome Sequences
Suffix tree is an important data structure for indexing a long sequence (like a genome sequence) or a concatenation of sequences. It finds many applications in practice, especiall...
Swee-Seong Wong, Wing-Kin Sung, Limsoon Wong
ADBIS
2008
Springer
142views Database» more  ADBIS 2008»
14 years 2 months ago
Evaluating Performance and Quality of XML-Based Similarity Joins
A similarity join correlating fragments in XML documents, which are similar in structure and content, can be used as the core algorithm to support data cleaning and data integratio...
Leonardo Ribeiro, Theo Härder
NAR
2011
183views Computer Vision» more  NAR 2011»
12 years 10 months ago
IGRhCellID: integrated genomic resources of human cell lines for identification
Cell line identification is emerging as an essential method for every cell line user in research community to avoid using misidentified cell lines for experiments and publications...
Cheng-Kai Shiau, De-Leung Gu, Chian-Feng Chen, Chi...