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» Data Quality in Genome Databases
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NAR
2000
152views more  NAR 2000»
13 years 9 months ago
ASDB: database of alternatively spliced genes
Version 2.1 of ASDB (Alternative Splicing Data Base) contains 1922 protein and 2486 DNA sequences. The protein entries from SWISS-PROT are joined into clusters corresponding to al...
I. Dralyuk, Michael Brudno, Mikhail S. Gelfand, Ma...
BMCBI
2007
95views more  BMCBI 2007»
13 years 9 months ago
Methods for estimating human endogenous retrovirus activities from EST databases
Background: Human endogenous retroviruses (HERVs) are surviving traces of ancient retrovirus infections and now reside within the human DNA. Recently HERV expression has been dete...
Merja Oja, Jaakko Peltonen, Jonas Blomberg, Samuel...
IMTCI
2004
Springer
14 years 2 months ago
Intelligent Data Integration Middleware Based on Updateable Views
We present a new approach to the grid technology that is based on updateable views. Views are used in two ways: (1) as wrappers of local servers that adopt local schemata to the fe...
Hanna Kozankiewicz, Krzysztof Stencel, Kazimierz S...
BIBE
2003
IEEE
183views Bioinformatics» more  BIBE 2003»
14 years 2 months ago
Effective Indexing and Filtering for Similarity Search in Large Biosequence Databases
We present a multi-dimensional indexing approach for fast sequence similarity search in DNA and protein databases. In particular, we propose effective transformations of subsequen...
Ozgur Ozturk, Hakan Ferhatosmanoglu
KAIS
2006
164views more  KAIS 2006»
13 years 9 months ago
On efficiently summarizing categorical databases
Frequent itemset mining was initially proposed and has been studied extensively in the context of association rule mining. In recent years, several studies have also extended its a...
Jianyong Wang, George Karypis