Next-generation high throughput sequencing instruments are capable of generating hundreds of millions of reads in a single run. Mapping those reads to a reference genome is an ext...
With rapid advances in VLSI technology, Field Programmable Gate Arrays (FPGAs) are receiving the attention of the Parallel and High Performance Computing community. In this paper,...
Uday Bondhugula, Ananth Devulapalli, Joseph Fernan...
The finite difference discretization of the Poisson equation in three dimensions results in a large, sparse, and highly structured system of linear equations. This prototype prob...
Knowledge about the workload is an important aspect for scheduling of resources as parallel computers or Grid components. As the scheduling quality highly depends on the character...
—Divisible load model allows scheduling algorithms that give nearly optimal makespan with practical computational complexity. Beaumont et al. have shown that their algorithm prod...