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» Design and comparison of acceleration methods for touchpad
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RECOMB
2004
Springer
14 years 7 months ago
Designing multiple simultaneous seeds for DNA similarity search
The challenge of similarity search in massive DNA sequence databases has inspired major changes in BLAST-style alignment tools, which accelerate search by inspecting only pairs of...
Yanni Sun, Jeremy Buhler
SIGMOD
2007
ACM
196views Database» more  SIGMOD 2007»
14 years 6 months ago
GPUQP: query co-processing using graphics processors
We present GPUQP, a relational query engine that employs both CPUs and GPUs (Graphics Processing Units) for in-memory query co-processing. GPUs are commodity processors traditiona...
Rui Fang, Bingsheng He, Mian Lu, Ke Yang, Naga K. ...
ARC
2009
Springer
188views Hardware» more  ARC 2009»
14 years 1 months ago
Word-Length Optimization and Error Analysis of a Multivariate Gaussian Random Number Generator
Abstract. Monte Carlo simulation is one of the most widely used techniques for computationally intensive simulations in mathematical analysis and modeling. A multivariate Gaussian ...
Chalermpol Saiprasert, Christos-Savvas Bouganis, G...
MOBIWAC
2009
ACM
13 years 11 months ago
Adaptive, direction-aware data dissemination for diverse sensor mobility
We consider sensor networks where the sensor nodes are attached on entities that move in a highly dynamic, heterogeneous manner. To capture this mobility diversity we introduce a ...
Azzedine Boukerche, Dionysios Efstathiou, Sotiris ...
BMCBI
2011
12 years 10 months ago
Detection of Lineage-Specific Evolutionary Changes among Primate Species
Background: Comparison of the human genome with other primates offers the opportunity to detect evolutionary events that created the diverse phenotypes among the primate species. ...
Mihaela Pertea, Geo Pertea, Steven L. Salzberg