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    RECOMB
    2007
    Springer
    166views Computational Biology» more  RECOMB 2007»
    Design of Compact, Universal DNA Microarrays for Protein Binding Microarray Experiments
    14 years 7 months ago
    Design of Compact, Universal DNA Microarrays for Protein Binding Microarray Experiments
    Download  thebrain.bwh.harvard.edu
    Our group has recently developed a compact, universal protein binding microarray (PBM) that can be used to determine the binding preferences of transcription factors (TFs) [1]. Thi...
    Anthony A. Philippakis, Aaron M. Qureshi, Michael ...
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    BMCBI
    2006
    110views more  BMCBI 2006»
    Design of a combinatorial DNA microarray for protein-DNA interaction studies
    13 years 7 months ago
    Design of a combinatorial DNA microarray for protein-DNA interaction studies
    Download  www.biomedcentral.com
    Background: Discovery of precise specificity of transcription factors is an important step on the way to understanding the complex mechanisms of gene regulation in eukaryotes. Rec...
    Julian Mintseris, Michael B. Eisen
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    NAR
    2011
    196views Computer Vision» more  NAR 2011»
    UniPROBE, update 2011: expanded content and search tools in the online database of protein-binding microarray data on protein-DN
    12 years 10 months ago
    UniPROBE, update 2011: expanded content and search tools in the online database of protein-binding microarray data on protein-DN
    Download  nar.oxfordjournals.org
    The Universal PBM Resource for OligonucleotideBinding Evaluation (UniPROBE) database is a centralized repository of information on the DNAbinding preferences of proteins as determ...
    Kimberly Robasky, Martha L. Bulyk
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    BMCBI
    2006
    127views more  BMCBI 2006»
    Improvement in the Reproducibility and Accuracy of DNA Microarray Quantification by Optimizing Hybridization Conditions
    13 years 7 months ago
    Improvement in the Reproducibility and Accuracy of DNA Microarray Quantification by Optimizing Hybridization Conditions
    Download  www.biomedcentral.com
    Background: DNA microarrays, which have been increasingly used to monitor mRNA transcripts at a global level, can provide detailed insight into cellular processes involved in resp...
    Tao Han, Cathy D. Melvin, Leming M. Shi, William S...
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    BMCBI
    2010
    153views more  BMCBI 2010»
    Starr: Simple Tiling ARRay analysis of Affymetrix ChIP-chip data
    13 years 7 months ago
    Starr: Simple Tiling ARRay analysis of Affymetrix ChIP-chip data
    Download  www.biomedcentral.com
    Background: Chromatin immunoprecipitation combined with DNA microarrays (ChIP-chip) is an assay used for investigating DNA-protein-binding or post-translational chromatin/histone ...
    Benedikt Zacher, Pei Fen Kuan, Achim Tresch
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