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» Design of DNA origami
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DNA
2006
Springer
146views Bioinformatics» more  DNA 2006»
13 years 10 months ago
On Times to Compute Shapes in 2D Tile Self-assembly
We study the times to grow structures within the tile self-assembly model proposed by Winfree, and the possible shapes that can be achieved. Our earlier work was confined to the g...
Yuliy M. Baryshnikov, Edward G. Coffman Jr., Boons...
BMCBI
2006
99views more  BMCBI 2006»
13 years 6 months ago
MAGIC-SPP: a database-driven DNA sequence processing package with associated management tools
Background: Processing raw DNA sequence data is an especially challenging task for relatively small laboratories and core facilities that produce as many as 5000 or more DNA seque...
Chun Liang, Feng Sun, Haiming Wang, Junfeng Qu, Ro...
BMCBI
2007
247views more  BMCBI 2007»
13 years 6 months ago
A survey of DNA motif finding algorithms
Background: Unraveling the mechanisms that regulate gene expression is a major challenge in biology. An important task in this challenge is to identify regulatory elements, especi...
Modan K. Das, Ho-Kwok Dai
APBC
2004
108views Bioinformatics» more  APBC 2004»
13 years 8 months ago
Ladderlike Stepping and Interval Jumping Searching Algorithms for DNA Sequences
In this study we have designed a novel algorithm for searching common segments in multiple DNA sequences. To improve efficiency in pattern searching, combination of hashing encodi...
Tun-Wen Pai, Margaret Dah-Tsyr Chang, Jia-Han Chu,...
ICES
2001
Springer
78views Hardware» more  ICES 2001»
13 years 11 months ago
Embryonics: Artificial Cells Driven by Artificial DNA
Abstract. Embryonics is a long-term research project attempting to draw inspiration from the biological process of ontogeny, to implement novel digital computing machines endowed w...
Lucian Prodan, Gianluca Tempesti, Daniel Mange, An...